SPINE for MATLAB

Scale Partitioning by Incremental Nested Entropy. You supply a measure and an orientation; everything after them is computed.

Read the user guide first — worked scenarios, runnable section by section. The pages below are the reference.

Start here

spineApply SPINE to raw data in one call.
spineSummarySay in words what a partition found.
spineCompareRun the same data under several measures and see whether they agree.

Choosing a measure

spineMeasureTurn user data into a nonnegative measure for SPINE.

Looking at it

spineDataPlotDraw your data in the space it lives in, coloured by score.
spinePlotShow where a SPINE partition came from: the measure, and the profile.
spineNetworkPlotDraw a network with its nodes coloured by SPINE score.
spineScoreMapSequential colormap for SPINE scores.

Provenance

spineVersionReport which copy of SPINE is running, and what it is.

Also

Choosing a measure is the piece to read before applying SPINE to your own problem.


Generated by matlab/doc/buildDocs.m. Every example on these pages was executed during the build.